Alignment of alleles: Chinese perch (Siniperca chuatsi) IGIV1S6

When several alleles are shown, the nucleotide mutations and amino acid changes for a given codon are indicated in red letters. These polymorphic mutations are reported in Tables of alleles.
Dashes indicate identical nucleotides. Dots indicate gaps according to the IMGT unique numbering. Blanks indicate partial sequences (blanks at the 5' and/or 3' end).

                                  1   2   3   4   5   6   7   8   9  10  11  12  13  14  15  16  17  18  19  20

  AY013293,IGIV1S6*01

                                                        _________________CDR1-IMGT______________________
                                 21  22  23  24  25  26  27  28  29  30  31  32  33  34  35  36  37  38  39  40

  AY013293,IGIV1S6*01

                                                                                            _____________CDR2-IM
                                 41  42  43  44  45  46  47  48  49  50  51  52  53  54  55  56  57  58  59  60

  AY013293,IGIV1S6*01

                                GT__________________
                                 61  62  63  64  65  66  67  68  69  70  71  72  73  74  75  76  77  78  79  80

  AY013293,IGIV1S6*01

                                 81  82  83  84  85  86  87  88  89  90  91  92  93  94  95  96  97  98  99 100
                                                                             S   G   V   Q   A   E   D   S   G
  AY013293,IGIV1S6*01                                                       AGT GGC GTT CAG GCT GAA GAT TCA GGA

                                                _____CDR3-IMGT__________
                                101 102 103 104 105 106 107 108 109 110
                                 V   Y   Y   C   Q   Q   G   Y   S   S
  AY013293,IGIV1S6*01           GTT TAC TAC TGT CAG CAG GGT TAC AGC TCG  #c
#c: rearranged cDNA

This alignment has been generated with the IMGT/AlleleAlign tool developed by Mehdi Yousfi (31/07/2001)

Created: 01/10/2003
Author: Nathalie Bosc